CDS

Accession Number TCMCG066C29764
gbkey CDS
Protein Id XP_034568476.1
Location join(<260217..260581,260706..260765,261554..261670,261803..261922,262041..262182,262276..262452,262521..262874,262989..263410,263499..263622,263735..263986)
Gene LOC117833166
GeneID 117833166
Organism Setaria viridis

Protein

Length 710aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034712585.1
Definition LOW QUALITY PROTEIN: probable rhamnogalacturonate lyase B, partial [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
AACAAGCTGCTAGCTACGAGACCTTCCCGTCCAACGTCGTCGTCAAGTCATGCATCGTCCGTTCAGGGCGCACTAACAAGTGCACCGCGCGCGTACCACGACTGCCCGGCGTCTGCGTGCCGGCCGGCCGGGCTTGGCCTGCCTCTACTACAAATCTCTTACCTCTCCGATCCTTTTCTTCAATCTCTTACCTCTTCTTCTTCTTCCTCCTCCTCCTCGATCGCCATTTGTGCATGCATACAGGTGCTCGTGGACAATGGCGTGGTGCAGGTGACGCTGTCCAAACCGCAGGGCCATATCACCGCCGTCGGCTACAACGGCGAGCGCAACCTGCTGCACTACGCCGGACAGGAGAACTCGGGAGGGTACTGGGATGTGGTGTGGAACTGTCCCGGCTCCGATCACCCAAGAGGGATGATCGACATGTTGGACAGTACAGAGTTCAAGGTCATATCCTCAAGCCAGGAGCAAGTGGAGCTTTCTTTCAGGAGTACATATAACCCATCATGTCAAGATAGTGTTCGGCTCAACATTGACAAGAGACTTGTGATGCTGAAAGGCAGCTCTGGGTTCTACTGCTACGCCATCTTTGAGCACACCAGCAACTGGCCTGCCATGAACATCTCAGAGGCTCGGCTCGCTTTCAAACTAAACACGGACAAGTTCAACTACATGGCGATTTCAGACGACATACAAAGATACATGCCCAGCGCGGCAGACAGAGACGAGCCTCGAGGCACTGCACTGGCCTACAAGGAGGCTGTTCTTCTCGTTAACCCTGAGGAGCCACAGTTCAAGGGAGAGGTGGATGACAAGTACCAGTACTCGCTGGACAACAAGGACAACGTCGTCCATGGATGGATCAGCAGCAATCACCCCAACCCCATGGGCTTCTGGGTCATCACCCCCAGCAACGAGTTCAAGAGCGGCGGCCCCATGAAGAGGGAACTCACCTCCCACGTCGGACCCACCTCCCTCACTATGTTTCTGGGAACGCATTACATTGGGGATGACATTGTCCTCAACATCGGCGGTGGCGAGTATTGGAAGAAGGTGTTGGGGCCAGTCTTCATCTACCTCAACTCGAGCCCGAAACACGGTGATCTCCGGGCTCTCTGGCAGGATGCCAAGGCGCAGGCGCAAACCGAAGTCAGCAAGTGGCCGTACAGCTTCCCTAAATCACCGGACTTCGCCAAGGCCGGCAAGAGGGGCTCCGTCACCGGAAGGCTCATGGTCAGAGACAGGTTCATGAGGAAGGACGACATGCCTACCCGGATGGCGTACATCGGCCTCGCCGCGCCCGGGCAGCCTGGCTCCTGGGCGACAGAGTGCAAGGGTTATCAGTTCTGGACGACGGCCACGTCCTGCGGCAGTTTCACCATTGGCAATGTCCGGGCAGGGGTGTACAACCTCTACGCATGGGTCCCCGGGGTTCTTGGAGACTACATGTACACTTGTGCTGTGACCGTAACGCCAGGTTGCGCCATCGACCTCGGTGATCTCGTGTTCTTGCCTCCAAGATCAGGCCCGACGCTGTGGGAGATCGGAGTCCCGGACGGGACCGCCGCGGAGTTCTTCATTCCTGACGTCGACCCCAGATACGCCAACCGGCTGTTTCTGCACAGGGAAAAGTAAGCTCTTCATCTTTGATGGCTTACGGAAGCATATGGCACGAGGCTGTACCCTGACAGCGATCAGAGCCTCACGGTCGGTCAGAGCGACCACTCCAAGGACTGGTTCTTTGCGCATGTCACAAGGAAGTTAGGCAATGGCAACGTGCCAGCAACGCGTCAGATAAGGTTCAACCTGGACCACGTCGTCGCGGACGGCACCTACACGCTGCGCATCGCCCTTGCAGCTGCTCAGATGTCCAGACTGCAGGTGCACGTGAACGGGGGCGGGTTGTTCACGACGCCGGAGTTCGGCGGCGGCAACGCCATCGCGCGGCACGGCATCCACGGCGTGCAGTGGAGCTTCGAGTTCCCAATCAGGGGGTACCTGCTGCAGGAAGGCGAGAACAGGTTGAGCATCACGCAGAGCAGGGCCTTTGGCGAGTTCTTGGGGGTCATGTACGACTACATCCGCCTGGAAGGACCTCCCGGATCCTGGCGAGACCCCACGCGACGGCCATGA
Protein:  
NKLLATRPSRPTSSSSHASSVQGALTSAPRAYHDCPASACRPAGLGLPLLQISYLSDPFLQSLTSSSSSSSSSIAICACIQVLVDNGVVQVTLSKPQGHITAVGYNGERNLLHYAGQENSGGYWDVVWNCPGSDHPRGMIDMLDSTEFKVISSSQEQVELSFRSTYNPSCQDSVRLNIDKRLVMLKGSSGFYCYAIFEHTSNWPAMNISEARLAFKLNTDKFNYMAISDDIQRYMPSAADRDEPRGTALAYKEAVLLVNPEEPQFKGEVDDKYQYSLDNKDNVVHGWISSNHPNPMGFWVITPSNEFKSGGPMKRELTSHVGPTSLTMFLGTHYIGDDIVLNIGGGEYWKKVLGPVFIYLNSSPKHGDLRALWQDAKAQAQTEVSKWPYSFPKSPDFAKAGKRGSVTGRLMVRDRFMRKDDMPTRMAYIGLAAPGQPGSWATECKGYQFWTTATSCGSFTIGNVRAGVYNLYAWVPGVLGDYMYTCAVTVTPGCAIDLGDLVFLPPRSGPTLWEIGVPDGTAAEFFIPDVDPRYANRLFLHREKXALHLXWLTEAYGTRLYPDSDQSLTVGQSDHSKDWFFAHVTRKLGNGNVPATRQIRFNLDHVVADGTYTLRIALAAAQMSRLQVHVNGGGLFTTPEFGGGNAIARHGIHGVQWSFEFPIRGYLLQEGENRLSITQSRAFGEFLGVMYDYIRLEGPPGSWRDPTRRP